Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOBEC1P41238 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC236430.1-201ENST00000402231 743 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 PIN1P1-201ENST00000412108 996 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.98□□□□□ -0.17
APOBEC1P41238 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC004066.1-201ENST00000502488 802 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 TERF1P3-201ENST00000505638 1227 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC026410.3-201ENST00000514280 936 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 BRI3BPP1-201ENST00000594224 787 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.98□□□□□ -0.17
APOBEC1P41238 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.98□□□□□ -0.17
APOBEC1P41238 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 AC012508.2-201ENST00000567613 1472 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOBEC1P41238 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 DRD5P1-201ENST00000456605 1438 ntBASIC13.98□□□□□ -0.17
APOBEC1P41238 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBEC1P41238 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBEC1P41238 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
APOBEC1P41238 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 AL442647.2-201ENST00000429864 857 ntBASIC13.97□□□□□ -0.17
APOBEC1P41238 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.97□□□□□ -0.17
APOBEC1P41238 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 AC093813.1-201ENST00000605066 256 ntBASIC13.97□□□□□ -0.17
APOBEC1P41238 AL662799.1-202ENST00000614205 422 ntBASIC13.97□□□□□ -0.17
APOBEC1P41238 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms