Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC139749.1-202ENST00000617529 3139 ntBASIC16.98■□□□□ 0.31
KRT9P35527 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
KRT9P35527 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
KRT9P35527 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT9P35527 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT9P35527 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT9P35527 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
KRT9P35527 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.97■□□□□ 0.31
KRT9P35527 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT9P35527 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
KRT9P35527 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.97■□□□□ 0.31
KRT9P35527 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT9P35527 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 HLA-J-203ENST00000494367 1087 ntBASIC16.97■□□□□ 0.31
KRT9P35527 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT9P35527 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT9P35527 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT9P35527 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT9P35527 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT9P35527 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
KRT9P35527 ACE3P-201ENST00000423435 1973 ntBASIC16.97■□□□□ 0.31
KRT9P35527 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT9P35527 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 AC140479.7-201ENST00000636301 2332 ntBASIC16.96■□□□□ 0.31
KRT9P35527 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
KRT9P35527 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.96■□□□□ 0.31
KRT9P35527 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT9P35527 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.96■□□□□ 0.31
KRT9P35527 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT9P35527 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT9P35527 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT9P35527 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT9P35527 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.96■□□□□ 0.3
KRT9P35527 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.96■□□□□ 0.3
KRT9P35527 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT9P35527 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT9P35527 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
KRT9P35527 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.95■□□□□ 0.3
KRT9P35527 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.95■□□□□ 0.3
KRT9P35527 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms