Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
THBS4P35443 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 TARDBPP1-201ENST00000442013 1203 ntBASIC13.65□□□□□ -0.22
THBS4P35443 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS4P35443 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.65□□□□□ -0.22
THBS4P35443 AC097359.3-201ENST00000603982 1210 ntBASIC13.65□□□□□ -0.22
THBS4P35443 AL662799.1-202ENST00000614205 422 ntBASIC13.65□□□□□ -0.22
THBS4P35443 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
THBS4P35443 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS4P35443 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
THBS4P35443 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
THBS4P35443 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THBS4P35443 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THBS4P35443 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.64□□□□□ -0.23
THBS4P35443 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
THBS4P35443 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 AL353779.1-201ENST00000434793 351 ntBASIC13.64□□□□□ -0.23
THBS4P35443 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 AC093004.1-201ENST00000508850 424 ntBASIC13.64□□□□□ -0.23
THBS4P35443 TPRX2P-201ENST00000535362 881 ntBASIC13.64□□□□□ -0.23
THBS4P35443 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 LINC01115-203ENST00000606068 577 ntBASIC13.64□□□□□ -0.23
THBS4P35443 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 AL009178.2-201ENST00000597278 2719 ntBASIC13.64□□□□□ -0.23
THBS4P35443 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.64□□□□□ -0.23
THBS4P35443 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
THBS4P35443 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THBS4P35443 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS4P35443 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS4P35443 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
THBS4P35443 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS4P35443 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THBS4P35443 AC148477.4-201ENST00000613430 1793 ntBASIC13.63□□□□□ -0.23
THBS4P35443 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
THBS4P35443 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
THBS4P35443 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
THBS4P35443 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms