Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 AC020658.6-201ENST00000623564 1870 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 AC020910.5-201ENST00000623668 1865 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 AC008132.1-202ENST00000342005 1389 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.57■□□□□ 0.24
HOXC8P31273 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 AC104073.2-201ENST00000453737 312 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 AC106794.1-201ENST00000506935 792 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.57■□□□□ 0.24
HOXC8P31273 ALG3P1-201ENST00000508806 1114 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 AC024681.1-201ENST00000521917 487 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 RN7SL190P-201ENST00000582519 257 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 AC008825.2-201ENST00000603374 718 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 AP000346.4-201ENST00000614827 381 ntBASIC16.57■□□□□ 0.24
HOXC8P31273 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HOXC8P31273 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HOXC8P31273 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC8P31273 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 E2F3P2-201ENST00000447755 1422 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 AL359258.3-201ENST00000622910 2331 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HOXC8P31273 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HOXC8P31273 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HOXC8P31273 ACTG1P2-201ENST00000415776 1125 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 ACTG1P11-201ENST00000425411 1125 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 FAM58BP-201ENST00000439056 645 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 PUDPP3-201ENST00000445368 636 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 RN7SL720P-201ENST00000488178 304 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.56■□□□□ 0.24
HOXC8P31273 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.56■□□□□ 0.24
HOXC8P31273 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC8P31273 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HOXC8P31273 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.56■□□□□ 0.24
HOXC8P31273 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HOXC8P31273 AC132192.2-201ENST00000596206 1147 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 CU633904.3-201ENST00000624042 1029 ntBASIC16.56■□□□□ 0.24
HOXC8P31273 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HOXC8P31273 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC8P31273 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC8P31273 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC8P31273 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC8P31273 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC8P31273 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC8P31273 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC8P31273 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC8P31273 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC8P31273 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.55■□□□□ 0.24
HOXC8P31273 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms