Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD40LGP29965 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 AC023090.2-201ENST00000625182 2110 ntBASIC13.78□□□□□ -0.2
CD40LGP29965 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.78□□□□□ -0.2
CD40LGP29965 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 BNIP3P18-201ENST00000593976 575 ntBASIC13.78□□□□□ -0.2
CD40LGP29965 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40LGP29965 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40LGP29965 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 INTS4P1-201ENST00000438455 1935 ntBASIC13.78□□□□□ -0.2
CD40LGP29965 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CD40LGP29965 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40LGP29965 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40LGP29965 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40LGP29965 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CD40LGP29965 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40LGP29965 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40LGP29965 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 RCN1P2-201ENST00000398357 915 ntBASIC13.77□□□□□ -0.21
CD40LGP29965 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40LGP29965 HCG4-201ENST00000418983 998 ntBASIC13.77□□□□□ -0.21
CD40LGP29965 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 AC091607.1-201ENST00000490318 1060 ntBASIC13.77□□□□□ -0.21
CD40LGP29965 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.77□□□□□ -0.21
CD40LGP29965 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40LGP29965 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40LGP29965 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 MIR4313-201ENST00000580760 101 ntBASIC13.77□□□□□ -0.21
CD40LGP29965 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40LGP29965 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CD40LGP29965 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 AC018529.2-202ENST00000611482 3087 ntBASIC13.77□□□□□ -0.21
CD40LGP29965 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.77□□□□□ -0.21
CD40LGP29965 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms