Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KRT8P48-201ENST00000515599 1220 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 RNA5SP416-201ENST00000516838 111 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA3P29320 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.1■□□□□ 0.01
EPHA3P29320 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA3P29320 SPDYE9P-201ENST00000570642 692 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 SPDYE10P-202ENST00000612005 668 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 SPDYE8P-202ENST00000612377 668 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.1■□□□□ 0.01
EPHA3P29320 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 ST20-AS1-201ENST00000560255 4223 ntBASIC15.1■□□□□ 0.01
EPHA3P29320 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA3P29320 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA3P29320 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA3P29320 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 AC079781.5-202ENST00000641784 3743 ntBASIC15.09■□□□□ 0.01
EPHA3P29320 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
EPHA3P29320 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.09■□□□□ 0.01
EPHA3P29320 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA3P29320 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 IGHV3-62-201ENST00000520057 340 ntBASIC15.09■□□□□ 0.01
EPHA3P29320 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA3P29320 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA3P29320 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 AC027601.5-201ENST00000624065 2482 ntBASIC15.09■□□□□ 0.01
EPHA3P29320 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.09■□□□□ 0.01
EPHA3P29320 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
EPHA3P29320 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA3P29320 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA3P29320 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
EPHA3P29320 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
EPHA3P29320 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.08■□□□□ 0.01
EPHA3P29320 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.08■□□□□ 0.01
EPHA3P29320 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
EPHA3P29320 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA3P29320 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.08■□□□□ 0
EPHA3P29320 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.08■□□□□ 0
EPHA3P29320 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.08■□□□□ 0
EPHA3P29320 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 SLC25A39P2-201ENST00000537614 270 ntBASIC15.08■□□□□ 0
EPHA3P29320 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.08■□□□□ 0
EPHA3P29320 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.08■□□□□ 0
EPHA3P29320 AC011467.4-201ENST00000594891 528 ntBASIC15.08■□□□□ 0
EPHA3P29320 AC026120.1-201ENST00000611536 926 ntBASIC15.08■□□□□ 0
EPHA3P29320 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.08■□□□□ 0
EPHA3P29320 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA3P29320 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms