Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PTPN3P26045 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 UGT1A2P-201ENST00000454886 866 ntBASIC15.76■□□□□ 0.11
PTPN3P26045 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN3P26045 AC011467.4-201ENST00000594891 528 ntBASIC15.76■□□□□ 0.11
PTPN3P26045 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN3P26045 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 REXO1L4P-201ENST00000605109 1937 ntBASIC15.76■□□□□ 0.11
PTPN3P26045 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN3P26045 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 SPDYE19P-201ENST00000338590 713 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN3P26045 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 GAPDHP40-201ENST00000505218 1006 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 RNA5SP421-201ENST00000516864 134 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 TPRX2P-201ENST00000535362 881 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 CICP24-201ENST00000605464 2705 ntBASIC15.75■□□□□ 0.11
PTPN3P26045 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN3P26045 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN3P26045 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN3P26045 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN3P26045 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 REXO1L2P-201ENST00000425429 2069 ntBASIC15.74■□□□□ 0.11
PTPN3P26045 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN3P26045 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN3P26045 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN3P26045 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms