Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.28□□□□□ -0.28
TNFSF4P23510 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 AC127383.1-201ENST00000444697 1800 ntBASIC13.28□□□□□ -0.28
TNFSF4P23510 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 MIR661-201ENST00000384842 89 ntBASIC13.28□□□□□ -0.28
TNFSF4P23510 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 RN7SL399P-201ENST00000471648 279 ntBASIC13.28□□□□□ -0.28
TNFSF4P23510 FAM86LP-201ENST00000478302 853 ntBASIC13.28□□□□□ -0.28
TNFSF4P23510 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TNFSF4P23510 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.28□□□□□ -0.28
TNFSF4P23510 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.28□□□□□ -0.28
TNFSF4P23510 AC123567.1-201ENST00000548294 1261 ntBASIC13.28□□□□□ -0.28
TNFSF4P23510 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.28□□□□□ -0.28
TNFSF4P23510 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.28□□□□□ -0.28
TNFSF4P23510 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.28□□□□□ -0.28
TNFSF4P23510 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.28□□□□□ -0.28
TNFSF4P23510 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.28□□□□□ -0.28
TNFSF4P23510 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.28□□□□□ -0.28
TNFSF4P23510 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
TNFSF4P23510 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.27□□□□□ -0.28
TNFSF4P23510 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.27□□□□□ -0.28
TNFSF4P23510 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TNFSF4P23510 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
TNFSF4P23510 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TNFSF4P23510 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 RPL5P21-201ENST00000404620 815 ntBASIC13.27□□□□□ -0.29
TNFSF4P23510 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 MYCLP2-201ENST00000449268 967 ntBASIC13.27□□□□□ -0.29
TNFSF4P23510 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.27□□□□□ -0.29
TNFSF4P23510 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.27□□□□□ -0.29
TNFSF4P23510 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.27□□□□□ -0.29
TNFSF4P23510 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.27□□□□□ -0.29
TNFSF4P23510 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.27□□□□□ -0.29
TNFSF4P23510 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.27□□□□□ -0.29
TNFSF4P23510 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TNFSF4P23510 AC007431.3-201ENST00000623221 587 ntBASIC13.27□□□□□ -0.29
TNFSF4P23510 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 CLK3P2-201ENST00000427566 1453 ntBASIC13.27□□□□□ -0.29
TNFSF4P23510 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TNFSF4P23510 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TNFSF4P23510 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.27□□□□□ -0.29
TNFSF4P23510 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TNFSF4P23510 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms