Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AL078644.1-201ENST00000609881 752 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 GPALPP1-207ENST00000611650 899 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 CICP17-201ENST00000418553 2377 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NR4A1P22736 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NR4A1P22736 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 ACTG1P14-201ENST00000446382 1122 ntBASIC14.47□□□□□ -0.09
NR4A1P22736 YBX1P5-201ENST00000509441 847 ntBASIC14.47□□□□□ -0.09
NR4A1P22736 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 CYP2A7P1-201ENST00000595391 815 ntBASIC14.47□□□□□ -0.09
NR4A1P22736 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 AC091812.2-201ENST00000619081 385 ntBASIC14.47□□□□□ -0.09
NR4A1P22736 AC139530.3-201ENST00000620344 690 ntBASIC14.47□□□□□ -0.09
NR4A1P22736 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
NR4A1P22736 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NR4A1P22736 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR4A1P22736 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR4A1P22736 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 Z82170.1-201ENST00000625081 3192 ntBASIC14.46□□□□□ -0.09
NR4A1P22736 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.46□□□□□ -0.09
NR4A1P22736 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.46□□□□□ -0.09
NR4A1P22736 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.46□□□□□ -0.09
NR4A1P22736 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.46□□□□□ -0.09
NR4A1P22736 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 ALG1L5P-201ENST00000482043 771 ntBASIC14.46□□□□□ -0.09
NR4A1P22736 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.46□□□□□ -0.09
NR4A1P22736 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.46□□□□□ -0.09
NR4A1P22736 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.46□□□□□ -0.09
NR4A1P22736 AC020765.3-201ENST00000613051 740 ntBASIC14.46□□□□□ -0.09
NR4A1P22736 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.46□□□□□ -0.09
NR4A1P22736 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR4A1P22736 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms