Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 AC079776.1-201ENST00000401540 1152 ntBASIC16.86■□□□□ 0.29
RFX1P22670 AC074338.1-201ENST00000416825 156 ntBASIC16.86■□□□□ 0.29
RFX1P22670 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.86■□□□□ 0.29
RFX1P22670 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 AC015910.1-201ENST00000579400 975 ntBASIC16.86■□□□□ 0.29
RFX1P22670 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.86■□□□□ 0.29
RFX1P22670 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 CHCHD2P3-201ENST00000603038 451 ntBASIC16.86■□□□□ 0.29
RFX1P22670 AL606495.2-201ENST00000605867 535 ntBASIC16.86■□□□□ 0.29
RFX1P22670 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.86■□□□□ 0.29
RFX1P22670 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.85■□□□□ 0.29
RFX1P22670 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.85■□□□□ 0.29
RFX1P22670 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.85■□□□□ 0.29
RFX1P22670 KRT223P-202ENST00000449164 1292 ntBASIC16.85■□□□□ 0.29
RFX1P22670 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.85■□□□□ 0.29
RFX1P22670 AC074044.1-201ENST00000609673 707 ntBASIC16.85■□□□□ 0.29
RFX1P22670 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.85■□□□□ 0.29
RFX1P22670 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.85■□□□□ 0.29
RFX1P22670 AC023024.2-201ENST00000623561 1993 ntBASIC16.85■□□□□ 0.29
RFX1P22670 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.85■□□□□ 0.29
RFX1P22670 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.85■□□□□ 0.29
RFX1P22670 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
RFX1P22670 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 MROH4P-201ENST00000431302 1578 ntBASIC16.85■□□□□ 0.29
RFX1P22670 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFX1P22670 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.85■□□□□ 0.29
RFX1P22670 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 TCAF2P1-201ENST00000291129 2421 ntBASIC16.84■□□□□ 0.29
RFX1P22670 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.84■□□□□ 0.29
RFX1P22670 RPL13P2-201ENST00000440687 659 ntBASIC16.84■□□□□ 0.29
RFX1P22670 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.84■□□□□ 0.29
RFX1P22670 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 RN7SL837P-201ENST00000463010 287 ntBASIC16.84■□□□□ 0.29
RFX1P22670 TPRX2P-201ENST00000535362 881 ntBASIC16.84■□□□□ 0.29
RFX1P22670 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.84■□□□□ 0.29
RFX1P22670 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.84■□□□□ 0.29
RFX1P22670 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFX1P22670 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms