Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CAPN3P20807 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CAPN3P20807 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CAPN3P20807 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.95□□□□□ -0.02
CAPN3P20807 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.95□□□□□ -0.02
CAPN3P20807 AC055876.3-201ENST00000431496 288 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 TSPY16P-201ENST00000449843 468 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 FAM86C2P-203ENST00000528684 1004 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CAPN3P20807 AC243562.1-201ENST00000560672 389 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN3P20807 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.95□□□□□ -0.02
CAPN3P20807 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
CAPN3P20807 AC138649.4-201ENST00000612222 287 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 AC009093.7-201ENST00000623853 1223 ntBASIC14.95□□□□□ -0.02
CAPN3P20807 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.95□□□□□ -0.02
CAPN3P20807 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN3P20807 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CAPN3P20807 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CAPN3P20807 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN3P20807 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.94□□□□□ -0.02
CAPN3P20807 AC117489.1-201ENST00000625169 3217 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 RPL5P21-201ENST00000404620 815 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.94□□□□□ -0.02
CAPN3P20807 SPCS2P4-201ENST00000436160 681 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 AC002472.2-201ENST00000442739 958 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.94□□□□□ -0.02
CAPN3P20807 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 CR383656.12-201ENST00000549567 513 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.94□□□□□ -0.02
CAPN3P20807 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.94□□□□□ -0.02
CAPN3P20807 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.94□□□□□ -0.02
CAPN3P20807 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CAPN3P20807 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.94□□□□□ -0.02
CAPN3P20807 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN3P20807 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms