Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AGAP14-201ENST00000624701 2060 ntBASIC13.9□□□□□ -0.18
HLA-DOBP13765 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DOBP13765 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HLA-DOBP13765 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
HLA-DOBP13765 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.9□□□□□ -0.19
HLA-DOBP13765 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.89□□□□□ -0.19
HLA-DOBP13765 UGT1A2P-201ENST00000454886 866 ntBASIC13.89□□□□□ -0.19
HLA-DOBP13765 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC104794.3-201ENST00000566840 1248 ntBASIC13.89□□□□□ -0.19
HLA-DOBP13765 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC025181.2-201ENST00000606994 802 ntBASIC13.89□□□□□ -0.19
HLA-DOBP13765 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DOBP13765 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DOBP13765 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 LINC00528-201ENST00000600723 2160 ntBASIC13.88□□□□□ -0.19
HLA-DOBP13765 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 MEIS3P1-201ENST00000495167 958 ntBASIC13.88□□□□□ -0.19
HLA-DOBP13765 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 AL158212.4-201ENST00000624062 1286 ntBASIC13.88□□□□□ -0.19
HLA-DOBP13765 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms