Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.16■□□□□ 0.5
TOP1P11387 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.16■□□□□ 0.5
TOP1P11387 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.16■□□□□ 0.5
TOP1P11387 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TOP1P11387 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 AC067930.6-201ENST00000623257 4947 ntBASIC18.16■□□□□ 0.5
TOP1P11387 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TOP1P11387 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 AC105250.1-201ENST00000509378 2057 ntBASIC18.15■□□□□ 0.5
TOP1P11387 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TOP1P11387 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 AC008735.3-201ENST00000596646 500 ntBASIC18.15■□□□□ 0.5
TOP1P11387 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.15■□□□□ 0.5
TOP1P11387 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOP1P11387 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TOP1P11387 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TOP1P11387 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TOP1P11387 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TOP1P11387 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TOP1P11387 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
TOP1P11387 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TOP1P11387 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.14■□□□□ 0.49
TOP1P11387 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.14■□□□□ 0.49
TOP1P11387 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 AC106886.1-201ENST00000568660 600 ntBASIC18.14■□□□□ 0.49
TOP1P11387 MIR5189-201ENST00000577370 114 ntBASIC18.14■□□□□ 0.49
TOP1P11387 CLUHP6-201ENST00000580789 941 ntBASIC18.14■□□□□ 0.49
TOP1P11387 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.14■□□□□ 0.49
TOP1P11387 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 AL162274.1-201ENST00000617191 1098 ntBASIC18.14■□□□□ 0.49
TOP1P11387 AC005252.2-201ENST00000624630 1141 ntBASIC18.14■□□□□ 0.49
TOP1P11387 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.14■□□□□ 0.49
TOP1P11387 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TOP1P11387 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOP1P11387 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms