Protein–RNA interactions for Protein: P0CI01

SPDYE6, Putative speedy protein E6, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE6P0CI01 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 RNU4-40P-201ENST00000364351 143 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC092506.1-202ENST00000401022 528 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 POM121L10P-201ENST00000436994 1285 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC005077.2-201ENST00000449786 690 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 HIST2H2BC-201ENST00000498492 580 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 CBX3P7-201ENST00000532876 502 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC023968.2-201ENST00000560593 1049 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AC068987.2-201ENST00000565518 896 ntBASIC18.4■□□□□ 0.54
SPDYE6P0CI01 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPDYE6P0CI01 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPDYE6P0CI01 LRRC59-203ENST00000576448 1531 ntBASIC18.39■□□□□ 0.54
SPDYE6P0CI01 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 AC007787.1-201ENST00000588095 1583 ntBASIC18.39■□□□□ 0.53
SPDYE6P0CI01 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 NUCKS1P1-201ENST00000452067 703 ntBASIC18.39■□□□□ 0.53
SPDYE6P0CI01 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 FO681491.1-202ENST00000623392 737 ntBASIC18.39■□□□□ 0.53
SPDYE6P0CI01 AC068057.2-201ENST00000624047 895 ntBASIC18.39■□□□□ 0.53
SPDYE6P0CI01 AC120349.3-201ENST00000624377 529 ntBASIC18.39■□□□□ 0.53
SPDYE6P0CI01 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPDYE6P0CI01 PCDHA12-202ENST00000613593 2588 ntBASIC18.38■□□□□ 0.53
SPDYE6P0CI01 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 AL645937.2-201ENST00000396808 931 ntBASIC18.38■□□□□ 0.53
SPDYE6P0CI01 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.38■□□□□ 0.53
SPDYE6P0CI01 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms