Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.06■□□□□ 0
LINGO3P0C6S8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
LINGO3P0C6S8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.06■□□□□ 0
LINGO3P0C6S8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINGO3P0C6S8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LINGO3P0C6S8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.05■□□□□ 0
LINGO3P0C6S8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.05■□□□□ 0
LINGO3P0C6S8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LINGO3P0C6S8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LINGO3P0C6S8 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
LINGO3P0C6S8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.05■□□□□ 0
LINGO3P0C6S8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
LINGO3P0C6S8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINGO3P0C6S8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINGO3P0C6S8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.05■□□□□ -0
LINGO3P0C6S8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.05■□□□□ -0
LINGO3P0C6S8 FAM58CP-201ENST00000435741 640 ntBASIC15.05■□□□□ -0
LINGO3P0C6S8 DNAJB3-201ENST00000446806 729 ntBASIC15.05■□□□□ -0
LINGO3P0C6S8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.05■□□□□ -0
LINGO3P0C6S8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.05■□□□□ -0
LINGO3P0C6S8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.05■□□□□ -0
LINGO3P0C6S8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
LINGO3P0C6S8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.05■□□□□ -0
LINGO3P0C6S8 AC092902.6-201ENST00000641783 218 ntBASIC15.05■□□□□ -0
LINGO3P0C6S8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.05■□□□□ -0
LINGO3P0C6S8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.05■□□□□ -0
LINGO3P0C6S8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LINGO3P0C6S8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINGO3P0C6S8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 AC019294.4-201ENST00000561777 2905 ntBASIC15.04■□□□□ -0
LINGO3P0C6S8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.04■□□□□ -0
LINGO3P0C6S8 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 U82695.1-201ENST00000635752 1889 ntBASIC15.04■□□□□ -0
LINGO3P0C6S8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.04■□□□□ -0
LINGO3P0C6S8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 BX842568.4-201ENST00000421222 227 ntBASIC15.04■□□□□ -0
LINGO3P0C6S8 MKNK2P1-201ENST00000437526 628 ntBASIC15.04■□□□□ -0
LINGO3P0C6S8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.04■□□□□ -0
LINGO3P0C6S8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.04■□□□□ -0
LINGO3P0C6S8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms