Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.28■□□□□ 0.04
RBP1P09455 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RBP1P09455 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RBP1P09455 AC112482.1-201ENST00000492080 688 ntBASIC15.28■□□□□ 0.04
RBP1P09455 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.28■□□□□ 0.04
RBP1P09455 AL512356.2-201ENST00000546955 174 ntBASIC15.28■□□□□ 0.04
RBP1P09455 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBP1P09455 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.28■□□□□ 0.04
RBP1P09455 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.28■□□□□ 0.04
RBP1P09455 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.28■□□□□ 0.04
RBP1P09455 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RBP1P09455 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBP1P09455 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBP1P09455 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RBP1P09455 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.27■□□□□ 0.04
RBP1P09455 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
RBP1P09455 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.27■□□□□ 0.04
RBP1P09455 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.27■□□□□ 0.04
RBP1P09455 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 AL080243.2-201ENST00000418783 582 ntBASIC15.27■□□□□ 0.04
RBP1P09455 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.27■□□□□ 0.04
RBP1P09455 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RBP1P09455 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.27■□□□□ 0.04
RBP1P09455 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.27■□□□□ 0.04
RBP1P09455 AC025048.3-201ENST00000590609 569 ntBASIC15.27■□□□□ 0.04
RBP1P09455 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.27■□□□□ 0.04
RBP1P09455 AC005702.4-201ENST00000618393 416 ntBASIC15.27■□□□□ 0.04
RBP1P09455 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.27■□□□□ 0.04
RBP1P09455 LINC00628-201ENST00000628516 1289 ntBASIC15.27■□□□□ 0.04
RBP1P09455 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBP1P09455 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.27■□□□□ 0.03
RBP1P09455 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBP1P09455 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBP1P09455 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RBP1P09455 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBP1P09455 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBP1P09455 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.27■□□□□ 0.03
RBP1P09455 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RBP1P09455 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
RBP1P09455 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms