Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN1P07384 AZGP1P1-201ENST00000411909 902 ntBASIC15.3■□□□□ 0.04
CAPN1P07384 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN1P07384 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CAPN1P07384 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN1P07384 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 AL662799.1-202ENST00000614205 422 ntBASIC15.3■□□□□ 0.04
CAPN1P07384 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN1P07384 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CAPN1P07384 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN1P07384 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN1P07384 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
CAPN1P07384 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
CAPN1P07384 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 SPDYE17-201ENST00000412399 783 ntBASIC15.29■□□□□ 0.04
CAPN1P07384 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPN1P07384 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 AL512361.1-201ENST00000554200 418 ntBASIC15.29■□□□□ 0.04
CAPN1P07384 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.29■□□□□ 0.04
CAPN1P07384 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.29■□□□□ 0.04
CAPN1P07384 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.29■□□□□ 0.04
CAPN1P07384 AL035252.4-201ENST00000624174 288 ntBASIC15.29■□□□□ 0.04
CAPN1P07384 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPN1P07384 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN1P07384 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN1P07384 AL607033.1-201ENST00000623900 1599 ntBASIC15.28■□□□□ 0.04
CAPN1P07384 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPN1P07384 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN1P07384 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CAPN1P07384 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CAPN1P07384 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC136604.1-201ENST00000418535 575 ntBASIC15.28■□□□□ 0.04
CAPN1P07384 AC005034.1-201ENST00000426657 489 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms