Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.82□□□□□ -0.52
TCRAP04437 AL031284.1-201ENST00000419297 478 ntBASIC11.82□□□□□ -0.52
TCRAP04437 AC142381.1-201ENST00000426099 345 ntBASIC11.82□□□□□ -0.52
TCRAP04437 GHSR-202ENST00000427970 912 ntBASIC11.82□□□□□ -0.52
TCRAP04437 AC079776.4-201ENST00000511039 504 ntBASIC11.82□□□□□ -0.52
TCRAP04437 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.82□□□□□ -0.52
TCRAP04437 AC027307.2-201ENST00000591252 911 ntBASIC11.82□□□□□ -0.52
TCRAP04437 AC116407.3-201ENST00000623905 1129 ntBASIC11.82□□□□□ -0.52
TCRAP04437 AC008267.7-201ENST00000624570 1194 ntBASIC11.82□□□□□ -0.52
TCRAP04437 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 AC087386.2-201ENST00000623212 4637 ntBASIC11.82□□□□□ -0.52
TCRAP04437 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRAP04437 AC113367.3-201ENST00000508316 1912 ntBASIC11.82□□□□□ -0.52
TCRAP04437 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRAP04437 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TCRAP04437 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 AC093909.1-201ENST00000504731 1122 ntBASIC11.81□□□□□ -0.52
TCRAP04437 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 AC018845.2-201ENST00000568326 409 ntBASIC11.81□□□□□ -0.52
TCRAP04437 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 AP002472.1-201ENST00000577490 586 ntBASIC11.81□□□□□ -0.52
TCRAP04437 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRAP04437 AC099522.2-201ENST00000607001 744 ntBASIC11.81□□□□□ -0.52
TCRAP04437 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TCRAP04437 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 AP000845.1-201ENST00000581677 2131 ntBASIC11.81□□□□□ -0.52
TCRAP04437 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms