Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 Z69890.1-201ENST00000382990 339 ntBASIC9.32□□□□□ -0.92
APOBP04114 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC9.32□□□□□ -0.92
APOBP04114 KRT17P4-201ENST00000429445 819 ntBASIC9.32□□□□□ -0.92
APOBP04114 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC9.32□□□□□ -0.92
APOBP04114 PEBP1P2-201ENST00000603980 558 ntBASIC9.32□□□□□ -0.92
APOBP04114 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC9.32□□□□□ -0.92
APOBP04114 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 AC090502.4-201ENST00000551714 1386 ntBASIC9.32□□□□□ -0.92
APOBP04114 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
APOBP04114 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC9.32□□□□□ -0.92
APOBP04114 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 MIR648-201ENST00000385046 94 ntBASIC9.32□□□□□ -0.92
APOBP04114 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC9.32□□□□□ -0.92
APOBP04114 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC9.32□□□□□ -0.92
APOBP04114 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 AC009884.2-201ENST00000603110 324 ntBASIC9.32□□□□□ -0.92
APOBP04114 AC138466.5-201ENST00000624002 808 ntBASIC9.32□□□□□ -0.92
APOBP04114 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
APOBP04114 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC9.32□□□□□ -0.92
APOBP04114 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
APOBP04114 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
APOBP04114 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 AC026470.1-201ENST00000478038 846 ntBASIC9.32□□□□□ -0.92
APOBP04114 MIR2392-201ENST00000584881 84 ntBASIC9.32□□□□□ -0.92
APOBP04114 AC008825.2-201ENST00000603374 718 ntBASIC9.32□□□□□ -0.92
APOBP04114 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 LINC02447-202ENST00000501888 2146 ntBASIC9.32□□□□□ -0.92
APOBP04114 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC9.32□□□□□ -0.92
APOBP04114 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
APOBP04114 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC9.31□□□□□ -0.92
APOBP04114 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 FTX-216ENST00000638985 1367 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
APOBP04114 AC003102.2-201ENST00000589195 1469 ntBASIC9.31□□□□□ -0.92
APOBP04114 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 AC092127.1-201ENST00000567093 3455 ntBASIC9.31□□□□□ -0.92
APOBP04114 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 CTSL-202ENST00000342020 933 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC9.31□□□□□ -0.92
APOBP04114 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC9.31□□□□□ -0.92
APOBP04114 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC9.31□□□□□ -0.92
APOBP04114 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms