Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TPSP2-201ENST00000561760 610 ntBASIC13.88□□□□□ -0.19
APOA1P02647 AC139887.3-201ENST00000568585 713 ntBASIC13.88□□□□□ -0.19
APOA1P02647 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.88□□□□□ -0.19
APOA1P02647 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.88□□□□□ -0.19
APOA1P02647 AC021097.1-201ENST00000607902 574 ntBASIC13.88□□□□□ -0.19
APOA1P02647 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 AC004899.2-201ENST00000622993 3860 ntBASIC13.87□□□□□ -0.19
APOA1P02647 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.87□□□□□ -0.19
APOA1P02647 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.87□□□□□ -0.19
APOA1P02647 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
APOA1P02647 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
APOA1P02647 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 TOB2P1-201ENST00000469761 992 ntBASIC13.87□□□□□ -0.19
APOA1P02647 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.87□□□□□ -0.19
APOA1P02647 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.87□□□□□ -0.19
APOA1P02647 MIR5100-201ENST00000579544 119 ntBASIC13.87□□□□□ -0.19
APOA1P02647 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 AL139288.1-201ENST00000623748 933 ntBASIC13.87□□□□□ -0.19
APOA1P02647 AL805961.1-202ENST00000641562 540 ntBASIC13.87□□□□□ -0.19
APOA1P02647 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOA1P02647 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
APOA1P02647 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOA1P02647 REXO1L1P-201ENST00000379010 6598 ntBASIC13.87□□□□□ -0.19
APOA1P02647 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
APOA1P02647 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 AC011474.4-201ENST00000623523 2076 ntBASIC13.86□□□□□ -0.19
APOA1P02647 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms