Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 AC007787.1-201ENST00000588095 1583 ntBASIC17.29■□□□□ 0.36
GGPS1O95749 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC004066.1-201ENST00000502488 802 ntBASIC17.29■□□□□ 0.36
GGPS1O95749 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC023310.1-201ENST00000554836 735 ntBASIC17.29■□□□□ 0.36
GGPS1O95749 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC132938.4-201ENST00000623835 848 ntBASIC17.29■□□□□ 0.36
GGPS1O95749 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.29■□□□□ 0.36
GGPS1O95749 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.29■□□□□ 0.36
GGPS1O95749 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
GGPS1O95749 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.29■□□□□ 0.36
GGPS1O95749 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 AC009090.5-201ENST00000624886 2285 ntBASIC17.28■□□□□ 0.36
GGPS1O95749 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.28■□□□□ 0.36
GGPS1O95749 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.28■□□□□ 0.36
GGPS1O95749 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
GGPS1O95749 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.28■□□□□ 0.36
GGPS1O95749 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.28■□□□□ 0.36
GGPS1O95749 RPL13AP20-201ENST00000459725 609 ntBASIC17.28■□□□□ 0.36
GGPS1O95749 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.28■□□□□ 0.36
GGPS1O95749 DUX4L45-201ENST00000566406 1057 ntBASIC17.28■□□□□ 0.36
GGPS1O95749 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 MIR6869-201ENST00000619434 62 ntBASIC17.28■□□□□ 0.36
GGPS1O95749 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.28■□□□□ 0.36
GGPS1O95749 PRSS30P-206ENST00000641773 873 ntBASIC17.28■□□□□ 0.36
GGPS1O95749 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
GGPS1O95749 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.28■□□□□ 0.36
GGPS1O95749 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GGPS1O95749 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GGPS1O95749 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
GGPS1O95749 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms