Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 PKD1P5-201ENST00000532415 10291 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 ELK2AP-201ENST00000392510 1007 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 CALR4P-201ENST00000431943 946 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.63■□□□□ 0.25
CSPG5O95196 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.63■□□□□ 0.25
CSPG5O95196 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.63■□□□□ 0.25
CSPG5O95196 AC104982.3-201ENST00000581995 514 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 AC092364.2-201ENST00000596710 2692 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
CSPG5O95196 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CSPG5O95196 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 AC026691.1-201ENST00000602502 2017 ntBASIC16.62■□□□□ 0.25
CSPG5O95196 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.62■□□□□ 0.25
CSPG5O95196 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 CNN2P8-201ENST00000421872 913 ntBASIC16.62■□□□□ 0.25
CSPG5O95196 HIST2H2BC-201ENST00000498492 580 ntBASIC16.62■□□□□ 0.25
CSPG5O95196 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.62■□□□□ 0.25
CSPG5O95196 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.62■□□□□ 0.25
CSPG5O95196 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.62■□□□□ 0.25
CSPG5O95196 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 TSPY26P-202ENST00000565928 3884 ntBASIC16.62■□□□□ 0.25
CSPG5O95196 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CSPG5O95196 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSPG5O95196 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.62■□□□□ 0.25
CSPG5O95196 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.62■□□□□ 0.25
CSPG5O95196 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 AP001282.1-201ENST00000531301 1499 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms