Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AC093433.1-201ENST00000458048 571 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CR383656.12-201ENST00000549567 513 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 MIR5189-201ENST00000577370 114 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AP005019.2-201ENST00000615104 511 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 IGHV3-72-202ENST00000621503 303 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AC091951.1-201ENST00000512854 2465 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 AL360270.3-201ENST00000609118 1348 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.62■□□□□ 0.09
PRAMEF11O60813 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 RNU1-114P-201ENST00000365297 166 ntBASIC15.61■□□□□ 0.09
PRAMEF11O60813 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC007389.4-201ENST00000454674 793 ntBASIC15.61■□□□□ 0.09
PRAMEF11O60813 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC132938.2-201ENST00000579188 680 ntBASIC15.61■□□□□ 0.09
PRAMEF11O60813 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 AL591163.1-201ENST00000641757 987 ntBASIC15.61■□□□□ 0.09
PRAMEF11O60813 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF11O60813 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF11O60813 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms