Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC073439.1-201ENST00000624121 1774 ntBASIC14.8□□□□□ -0.04
CLOCKO15516 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLOCKO15516 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.79□□□□□ -0.04
CLOCKO15516 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.79□□□□□ -0.04
CLOCKO15516 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.79□□□□□ -0.04
CLOCKO15516 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CLOCKO15516 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 AP006288.1-201ENST00000446065 395 ntBASIC14.79□□□□□ -0.04
CLOCKO15516 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.79□□□□□ -0.04
CLOCKO15516 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.79□□□□□ -0.04
CLOCKO15516 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.79□□□□□ -0.04
CLOCKO15516 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.79□□□□□ -0.04
CLOCKO15516 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.79□□□□□ -0.04
CLOCKO15516 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.79□□□□□ -0.04
CLOCKO15516 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLOCKO15516 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLOCKO15516 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CLOCKO15516 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CLOCKO15516 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CLOCKO15516 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLOCKO15516 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.78□□□□□ -0.04
CLOCKO15516 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 MKNK2P1-201ENST00000437526 628 ntBASIC14.78□□□□□ -0.04
CLOCKO15516 RHOQP3-201ENST00000437982 621 ntBASIC14.78□□□□□ -0.04
CLOCKO15516 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLOCKO15516 YBX1P5-201ENST00000509441 847 ntBASIC14.78□□□□□ -0.04
CLOCKO15516 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.78□□□□□ -0.04
CLOCKO15516 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.78□□□□□ -0.04
CLOCKO15516 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.78□□□□□ -0.04
CLOCKO15516 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLOCKO15516 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms