Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC002056.1-201ENST00000395613 760 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.64□□□□□ -0.71
NDUFA1O15239 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.64□□□□□ -0.71
NDUFA1O15239 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.64□□□□□ -0.71
NDUFA1O15239 IGHV3-22-201ENST00000520721 359 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NDUFA1O15239 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC243562.2-201ENST00000561247 970 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC068137.2-201ENST00000605408 478 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC004877.2-201ENST00000623941 599 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC025580.3-201ENST00000617932 1424 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 AL359881.3-201ENST00000602640 1721 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 AC010327.5-201ENST00000586923 3061 ntBASIC10.64□□□□□ -0.71
NDUFA1O15239 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 AC027601.5-201ENST00000624065 2482 ntBASIC10.63□□□□□ -0.71
NDUFA1O15239 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.63□□□□□ -0.71
NDUFA1O15239 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.63□□□□□ -0.71
NDUFA1O15239 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
NDUFA1O15239 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
NDUFA1O15239 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.63□□□□□ -0.71
NDUFA1O15239 GPX1P2-201ENST00000429271 606 ntBASIC10.63□□□□□ -0.71
NDUFA1O15239 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NDUFA1O15239 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms