Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 CLK3P2-201ENST00000427566 1453 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 AC138035.3-201ENST00000622706 2791 ntBASIC15.62■□□□□ 0.09
TRIM38O00635 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM38O00635 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM38O00635 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM38O00635 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM38O00635 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM38O00635 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM38O00635 AP003680.1-201ENST00000598970 3660 ntBASIC15.62■□□□□ 0.09
TRIM38O00635 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM38O00635 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
TRIM38O00635 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM38O00635 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM38O00635 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM38O00635 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 AC119751.2-201ENST00000504529 210 ntBASIC15.61■□□□□ 0.09
TRIM38O00635 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM38O00635 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
TRIM38O00635 AC008735.3-201ENST00000596646 500 ntBASIC15.61■□□□□ 0.09
TRIM38O00635 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM38O00635 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM38O00635 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM38O00635 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms