Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AC127383.1-201ENST00000444697 1800 ntBASIC18.88■□□□□ 0.61
RGPD3A6NKT7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 RPL35P9-201ENST00000446059 350 ntBASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 AP005212.2-201ENST00000584979 510 ntBASIC18.88■□□□□ 0.61
RGPD3A6NKT7 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.88■□□□□ 0.61
RGPD3A6NKT7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 PTGER4P2-201ENST00000328411 252 ntBASIC18.87■□□□□ 0.61
RGPD3A6NKT7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 AC108734.2-201ENST00000420887 1069 ntBASIC18.87■□□□□ 0.61
RGPD3A6NKT7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 PTGER4P3-201ENST00000458150 252 ntBASIC18.87■□□□□ 0.61
RGPD3A6NKT7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 AL118522.1-201ENST00000611368 560 ntBASIC18.87■□□□□ 0.61
RGPD3A6NKT7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RGPD3A6NKT7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC006449.5-201ENST00000610658 2098 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 MIR645-201ENST00000385283 94 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC010632.2-201ENST00000588369 1224 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AL137783.1-201ENST00000623494 1896 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 MIR1301-201ENST00000408518 82 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC131206.1-201ENST00000538078 1211 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 RN7SL357P-201ENST00000581065 298 ntBASIC18.86■□□□□ 0.61
RGPD3A6NKT7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RGPD3A6NKT7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms