Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TVP23AA6NH52 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.89□□□□□ -0.19
TVP23AA6NH52 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TVP23AA6NH52 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TVP23AA6NH52 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FO393414.2-201ENST00000405153 598 ntBASIC13.88□□□□□ -0.19
TVP23AA6NH52 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AP000344.2-201ENST00000512987 629 ntBASIC13.88□□□□□ -0.19
TVP23AA6NH52 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AC007967.4-201ENST00000614700 386 ntBASIC13.88□□□□□ -0.19
TVP23AA6NH52 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 LINC01101-201ENST00000622953 1884 ntBASIC13.88□□□□□ -0.19
TVP23AA6NH52 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TVP23AA6NH52 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TVP23AA6NH52 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 KRT8P12-202ENST00000472924 1397 ntBASIC13.87□□□□□ -0.19
TVP23AA6NH52 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AC013726.1-201ENST00000563747 2285 ntBASIC13.87□□□□□ -0.19
TVP23AA6NH52 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AC009093.7-201ENST00000623853 1223 ntBASIC13.87□□□□□ -0.19
TVP23AA6NH52 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TVP23AA6NH52 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 AJ011931.1-201ENST00000618749 2492 ntBASIC13.87□□□□□ -0.19
TVP23AA6NH52 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TVP23AA6NH52 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms