Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 AC138696.2-201ENST00000607376 223 ntBASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 C18orf15-201ENST00000623680 2534 ntBASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144AA2RUR9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 AL354877.1-201ENST00000424412 413 ntBASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 AC005730.2-201ENST00000564549 1184 ntBASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC144AA2RUR9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC144AA2RUR9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 CALR4P-201ENST00000431943 946 ntBASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144AA2RUR9 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms