Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RPL37AP1-201ENST00000412502 279 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RN7SL618P-201ENST00000477850 296 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 TEX28P1-201ENST00000613479 1221 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 TEX28P2-201ENST00000617764 1221 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC020658.6-201ENST00000623564 1870 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AL607033.1-201ENST00000623900 1599 ntBASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms