Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC134312.5-201ENST00000568031 1313 ntBASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC136604.1-201ENST00000418535 575 ntBASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 PHKG1P2-201ENST00000457537 863 ntBASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 CLUHP6-201ENST00000580789 941 ntBASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 GPR182-203ENST00000622922 591 ntBASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA9Q9Y5G4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 VDAC1P7-201ENST00000462417 847 ntBASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 AC000095.1-201ENST00000603208 874 ntBASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 RHOXF1P1-202ENST00000635473 501 ntBASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA9Q9Y5G4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms