Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 RNF216P1-203ENST00000404404 2427 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AL513477.1-201ENST00000602865 2407 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CLUHP2-201ENST00000426660 1303 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 OR2K2-202ENST00000374428 1038 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 RPL8P2-201ENST00000430538 502 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 MIR4683-201ENST00000579659 81 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC007881.3-201ENST00000608897 607 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC005052.1-201ENST00000625181 2492 ntBASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 CAP2P1-201ENST00000557743 1390 ntBASIC17.28■□□□□ 0.36
TRIM17Q9Y577 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 RN7SL67P-201ENST00000492147 296 ntBASIC17.28■□□□□ 0.36
TRIM17Q9Y577 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 AC009955.4-201ENST00000597192 544 ntBASIC17.28■□□□□ 0.36
TRIM17Q9Y577 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM17Q9Y577 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AL139008.1-201ENST00000437894 228 ntBASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AC009779.1-201ENST00000551138 283 ntBASIC17.27■□□□□ 0.36
TRIM17Q9Y577 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM17Q9Y577 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms