Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 NOC2LP1-201ENST00000450578 752 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 RN7SL181P-201ENST00000462921 277 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 NPM1P43-201ENST00000558669 786 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 RN7SL736P-201ENST00000613111 269 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 NAP1L6-202ENST00000641404 1222 ntBASIC20.71■□□□□ 0.91
PHF8Q9UPP1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHF8Q9UPP1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PHF8Q9UPP1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PHF8Q9UPP1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 AL355334.1-201ENST00000417713 215 ntBASIC20.7■□□□□ 0.9
PHF8Q9UPP1 KLF2P1-201ENST00000447438 1042 ntBASIC20.7■□□□□ 0.9
PHF8Q9UPP1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHF8Q9UPP1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.69■□□□□ 0.9
PHF8Q9UPP1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 FAM58BP-201ENST00000439056 645 ntBASIC20.69■□□□□ 0.9
PHF8Q9UPP1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 COX6A1P2-201ENST00000620597 330 ntBASIC20.69■□□□□ 0.9
PHF8Q9UPP1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
PHF8Q9UPP1 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.69■□□□□ 0.9
PHF8Q9UPP1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 AC011840.2-201ENST00000563063 1520 ntBASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHF8Q9UPP1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms