Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 ACTBP8-201ENST00000403258 1108 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 ACTG1P2-201ENST00000415776 1125 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 AC136604.1-201ENST00000418535 575 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 ACTG1P11-201ENST00000425411 1125 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 FGFR3P1-201ENST00000449999 601 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PPY2P-201ENST00000582808 702 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 AL645939.5-201ENST00000606834 243 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.3■□□□□ 0.04
NCDNQ9UBB6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCDNQ9UBB6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AL138799.1-201ENST00000448213 1675 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 FAM8A4P-201ENST00000435433 1213 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 IGLV3-15-201ENST00000518356 244 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AC135983.4-201ENST00000564116 1262 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AC073352.2-201ENST00000609385 439 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AC009084.3-201ENST00000623356 437 ntBASIC15.29■□□□□ 0.04
NCDNQ9UBB6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCDNQ9UBB6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms