Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AC026434.2-201ENST00000506094 1078 ntBASIC17.32■□□□□ 0.36
COL20A1Q9P218 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 AC087481.3-201ENST00000602886 1894 ntBASIC17.32■□□□□ 0.36
COL20A1Q9P218 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 SSR4P1-203ENST00000599569 2260 ntBASIC17.32■□□□□ 0.36
COL20A1Q9P218 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.32■□□□□ 0.36
COL20A1Q9P218 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.32■□□□□ 0.36
COL20A1Q9P218 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL20A1Q9P218 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 CLUHP2-201ENST00000426660 1303 ntBASIC17.31■□□□□ 0.36
COL20A1Q9P218 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 HOMER2P2-201ENST00000451621 847 ntBASIC17.31■□□□□ 0.36
COL20A1Q9P218 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 RPSAP36-202ENST00000494591 1261 ntBASIC17.31■□□□□ 0.36
COL20A1Q9P218 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.31■□□□□ 0.36
COL20A1Q9P218 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL20A1Q9P218 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL20A1Q9P218 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL20A1Q9P218 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL20A1Q9P218 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms