Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AL513477.1-201ENST00000602865 2407 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CHMP1AP1-201ENST00000445563 662 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 MESTP3-201ENST00000503460 968 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 FTLP10-202ENST00000505798 471 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 AC007663.3-201ENST00000609632 465 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 KRT8P4-201ENST00000509735 1454 ntBASIC17.15■□□□□ 0.34
VTA1Q9NP79 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.15■□□□□ 0.34
VTA1Q9NP79 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTA1Q9NP79 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AP003680.1-201ENST00000598970 3660 ntBASIC17.14■□□□□ 0.33
VTA1Q9NP79 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AL136309.1-201ENST00000403917 691 ntBASIC17.14■□□□□ 0.33
VTA1Q9NP79 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 HIST2H2BB-201ENST00000449108 381 ntBASIC17.14■□□□□ 0.33
VTA1Q9NP79 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 CLUHP2-201ENST00000426660 1303 ntBASIC17.14■□□□□ 0.33
VTA1Q9NP79 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTA1Q9NP79 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VTA1Q9NP79 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.13■□□□□ 0.33
VTA1Q9NP79 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms