Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC022616.1-201ENST00000518688 554 ntBASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 RPSAP15-201ENST00000448168 861 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 OLA1P2-201ENST00000395519 1264 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 MIR1301-201ENST00000408518 82 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 BPIFB5P-201ENST00000457066 1099 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AC092862.1-201ENST00000541534 533 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AC068867.1-201ENST00000559855 150 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC14.01□□□□□ -0.17
CHD8Q9HCK8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.01□□□□□ -0.17
CHD8Q9HCK8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 KRT8P31-201ENST00000504812 1408 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC007326.1-201ENST00000604539 458 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC115618.3-201ENST00000623114 425 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC008536.3-201ENST00000623282 1599 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CHD8Q9HCK8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CHD8Q9HCK8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14□□□□□ -0.17
CHD8Q9HCK8 NME6-208ENST00000435684 599 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 RPL35P9-201ENST00000446059 350 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14□□□□□ -0.17
CHD8Q9HCK8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 EEF1DP7-201ENST00000580496 513 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 AC009884.2-201ENST00000603110 324 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 AC140113.1-201ENST00000603467 169 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14□□□□□ -0.17
CHD8Q9HCK8 AC002044.2-201ENST00000624910 970 ntBASIC14□□□□□ -0.17
CHD8Q9HCK8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms