Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC254562.1-201ENST00000417586 456 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 GHSR-202ENST00000427970 912 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AL512356.2-201ENST00000546955 174 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC025048.3-201ENST00000590609 569 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC005702.4-201ENST00000618393 416 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AL691403.2-201ENST00000618460 490 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 LINC00628-201ENST00000628516 1289 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AL390755.1-201ENST00000623716 2027 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 AL009178.2-201ENST00000597278 2719 ntBASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRTM1Q9HBL6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 AC007686.3-201ENST00000619017 3487 ntBASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 FAM8A3P-201ENST00000427218 844 ntBASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 CNN2P11-201ENST00000429351 262 ntBASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 KRT18P64-201ENST00000434946 1219 ntBASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms