Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 DUX4L27-201ENST00000554796 1261 ntBASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 AC025181.2-201ENST00000606994 802 ntBASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 CICP24-201ENST00000605464 2705 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TSSK5P-201ENST00000423978 907 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AC114501.2-201ENST00000439631 535 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AC009477.1-201ENST00000452936 217 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AC092337.1-201ENST00000568699 1129 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 AL645728.2-202ENST00000641679 227 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 MIR600HG-201ENST00000449175 5984 ntBASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC40Q9H9A6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 MYO15B-237ENST00000642007 4893 ntBASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 AC013726.1-201ENST00000563747 2285 ntBASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms