Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AL137783.1-201ENST00000623494 1896 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC009090.5-201ENST00000624886 2285 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC078875.1-201ENST00000431907 724 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 YRDCP1-201ENST00000621419 643 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC051619.9-201ENST00000623237 597 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC092127.1-201ENST00000567093 3455 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 AC006058.4-201ENST00000624016 1670 ntBASIC19.1■□□□□ 0.65
CNTNAP4Q9C0A0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 REXO1L4P-201ENST00000605109 1937 ntBASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 AC239868.1-201ENST00000369385 493 ntBASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 SCARNA21-201ENST00000517026 139 ntBASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 HCG11-201ENST00000411553 5696 ntBASIC19.09■□□□□ 0.65
CNTNAP4Q9C0A0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms