Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RPL13P2-201ENST00000440687 659 ntBASIC10.86□□□□□ -0.67
UPK3BQ9BT76 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 RARRES2P5-201ENST00000564013 466 ntBASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 AC134407.2-201ENST00000625089 1978 ntBASIC10.86□□□□□ -0.67
UPK3BQ9BT76 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
UPK3BQ9BT76 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 GNAQP1-201ENST00000444815 1067 ntBASIC10.85□□□□□ -0.67
UPK3BQ9BT76 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SLED1-202ENST00000512051 380 ntBASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AC093726.1-201ENST00000608064 963 ntBASIC10.85□□□□□ -0.67
UPK3BQ9BT76 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms