Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 LTBR-211ENST00000543190 785 ntTSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 MIR3180-1-201ENST00000580374 94 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 MIR3180-3-201ENST00000584616 94 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 AL009183.1-201ENST00000603760 355 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 AL355877.3-201ENST00000622820 899 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 AC023794.5-201ENST00000564380 2157 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
LITAFQ99732 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 AC007787.1-201ENST00000588095 1583 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.3□□□□□ -0.76
LITAFQ99732 AC073548.1-201ENST00000624088 1882 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 INE2-201ENST00000630399 1874 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 AC012508.2-201ENST00000567613 1472 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 REXO1L4P-201ENST00000605109 1937 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 AC019294.4-201ENST00000561777 2905 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 AC114271.1-201ENST00000612689 2813 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
LITAFQ99732 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 AC004945.1-201ENST00000416738 983 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 AC136604.1-201ENST00000418535 575 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms