Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CDCA3Q99618 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CDCA3Q99618 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 RN7SL818P-201ENST00000485099 259 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 HLA-J-204ENST00000495278 958 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CDCA3Q99618 IGLV3-15-201ENST00000518356 244 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.85■□□□□ 0.13
CDCA3Q99618 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.85■□□□□ 0.13
CDCA3Q99618 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 RN7SL725P-201ENST00000606439 259 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 AC138696.2-201ENST00000607376 223 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDCA3Q99618 LINC02447-202ENST00000501888 2146 ntBASIC15.85■□□□□ 0.13
CDCA3Q99618 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.85■□□□□ 0.13
CDCA3Q99618 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDCA3Q99618 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.84■□□□□ 0.13
CDCA3Q99618 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 RN7SL181P-201ENST00000462921 277 ntBASIC15.84■□□□□ 0.13
CDCA3Q99618 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.84■□□□□ 0.13
CDCA3Q99618 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.84■□□□□ 0.13
CDCA3Q99618 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.84■□□□□ 0.13
CDCA3Q99618 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.84■□□□□ 0.13
CDCA3Q99618 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 AL360270.3-201ENST00000609118 1348 ntBASIC15.84■□□□□ 0.13
CDCA3Q99618 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms