Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 KRT18P34-201ENST00000488218 1270 ntBASIC13.16□□□□□ -0.3
CLCC1Q96S66 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCC1Q96S66 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCC1Q96S66 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 AC009090.5-201ENST00000624886 2285 ntBASIC13.15□□□□□ -0.3
CLCC1Q96S66 AC016027.1-202ENST00000607927 1699 ntBASIC13.15□□□□□ -0.3
CLCC1Q96S66 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 AC140658.5-201ENST00000438532 169 ntBASIC13.15□□□□□ -0.3
CLCC1Q96S66 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms