Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 PCDHA5-203ENST00000614258 4248 ntBASIC11.81□□□□□ -0.52
AP1S3Q96PC3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP1S3Q96PC3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 AC245100.5-201ENST00000452108 331 ntBASIC11.8□□□□□ -0.52
AP1S3Q96PC3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 SART3-203ENST00000546611 1184 ntBASIC11.8□□□□□ -0.52
AP1S3Q96PC3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 AC136621.1-201ENST00000624017 2304 ntBASIC11.8□□□□□ -0.52
AP1S3Q96PC3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP1S3Q96PC3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms