Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 KRT18P25-201ENST00000508931 1278 ntBASIC20.62■□□□□ 0.89
CFAP53Q96M91 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 AC106886.1-201ENST00000568660 600 ntBASIC20.62■□□□□ 0.89
CFAP53Q96M91 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP53Q96M91 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP53Q96M91 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP53Q96M91 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.62■□□□□ 0.89
CFAP53Q96M91 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP53Q96M91 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CFAP53Q96M91 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 KRT8P44-201ENST00000441609 1350 ntBASIC20.61■□□□□ 0.89
CFAP53Q96M91 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 AL355864.2-201ENST00000447420 863 ntBASIC20.61■□□□□ 0.89
CFAP53Q96M91 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 AL162274.1-201ENST00000617191 1098 ntBASIC20.61■□□□□ 0.89
CFAP53Q96M91 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CFAP53Q96M91 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CFAP53Q96M91 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 AL158070.2-201ENST00000623713 1621 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 AC148477.4-201ENST00000613430 1793 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 AC126365.1-201ENST00000578585 1514 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 AC005229.1-201ENST00000392885 409 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 AC114812.1-204ENST00000449669 728 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 AP001889.1-201ENST00000525414 633 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 PRSS30P-206ENST00000641773 873 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 MSTO2P-201ENST00000314835 1709 ntBASIC20.6■□□□□ 0.89
CFAP53Q96M91 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CFAP53Q96M91 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.6■□□□□ 0.89
CFAP53Q96M91 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms