Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 MIR648-201ENST00000385046 94 ntBASIC18.1■□□□□ 0.49
TRIM47Q96LD4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AC023310.1-201ENST00000554836 735 ntBASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 AL008638.5-201ENST00000623814 1298 ntBASIC18.1■□□□□ 0.49
TRIM47Q96LD4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM47Q96LD4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 AC007969.1-201ENST00000433675 447 ntBASIC18.09■□□□□ 0.49
TRIM47Q96LD4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 Z93015.1-201ENST00000451718 390 ntBASIC18.09■□□□□ 0.49
TRIM47Q96LD4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 AC243562.2-201ENST00000561247 970 ntBASIC18.09■□□□□ 0.49
TRIM47Q96LD4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 AC016629.1-201ENST00000596579 586 ntBASIC18.09■□□□□ 0.49
TRIM47Q96LD4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 AC069224.1-201ENST00000566372 1715 ntBASIC18.09■□□□□ 0.49
TRIM47Q96LD4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM47Q96LD4 PKD1P5-201ENST00000532415 10291 ntBASIC18.08■□□□□ 0.49
TRIM47Q96LD4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms