Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 AL033527.5-202ENST00000641632 1098 ntBASIC16.03■□□□□ 0.16
IFT43Q96FT9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IFT43Q96FT9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
IFT43Q96FT9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 AC005089.1-201ENST00000619486 2241 ntBASIC16.02■□□□□ 0.16
IFT43Q96FT9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 NME2P1-201ENST00000426182 414 ntBASIC16.02■□□□□ 0.16
IFT43Q96FT9 RN7SL618P-201ENST00000477850 296 ntBASIC16.02■□□□□ 0.16
IFT43Q96FT9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IFT43Q96FT9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 AL596325.1-201ENST00000563991 1082 ntBASIC16.02■□□□□ 0.16
IFT43Q96FT9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.02■□□□□ 0.16
IFT43Q96FT9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 AC092127.1-201ENST00000567093 3455 ntBASIC16.02■□□□□ 0.15
IFT43Q96FT9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
IFT43Q96FT9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.02■□□□□ 0.15
IFT43Q96FT9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.02■□□□□ 0.15
IFT43Q96FT9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.02■□□□□ 0.15
IFT43Q96FT9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.02■□□□□ 0.15
IFT43Q96FT9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IFT43Q96FT9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AL391825.1-201ENST00000457671 1364 ntBASIC16.01■□□□□ 0.15
IFT43Q96FT9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AC023157.3-201ENST00000619086 2088 ntBASIC16.01■□□□□ 0.15
IFT43Q96FT9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFT43Q96FT9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IFT43Q96FT9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms