Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 TIMM17BP1-201ENST00000545713 516 ntBASIC16.4■□□□□ 0.22
TRIM11Q96F44 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM11Q96F44 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM11Q96F44 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
TRIM11Q96F44 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
TRIM11Q96F44 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TRIM11Q96F44 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AC104457.1-201ENST00000401024 814 ntBASIC16.39■□□□□ 0.21
TRIM11Q96F44 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AP001160.2-201ENST00000596071 487 ntBASIC16.39■□□□□ 0.21
TRIM11Q96F44 AC000095.1-201ENST00000603208 874 ntBASIC16.39■□□□□ 0.21
TRIM11Q96F44 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.39■□□□□ 0.21
TRIM11Q96F44 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM11Q96F44 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 AP002414.2-201ENST00000591780 3365 ntBASIC16.39■□□□□ 0.21
TRIM11Q96F44 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM11Q96F44 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 LINC00528-201ENST00000600723 2160 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 AC044860.1-202ENST00000559481 777 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 AL844908.2-201ENST00000609461 460 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 AC023511.2-201ENST00000618803 211 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 AC004461.2-201ENST00000629517 803 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms