Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 INTS4P1-203ENST00000641008 3683 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AL591424.1-201ENST00000442569 1213 ntBASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 FDX1P1-201ENST00000449115 551 ntBASIC14.94□□□□□ -0.02
VPS33AQ96AX1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AC027601.4-201ENST00000611259 610 ntBASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AC026120.1-201ENST00000611536 926 ntBASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 GRK6P1-201ENST00000400595 1711 ntBASIC14.94□□□□□ -0.02
VPS33AQ96AX1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS33AQ96AX1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC015656.1-201ENST00000624209 3578 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 UXT-AS1-201ENST00000590504 1525 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 ACE3P-201ENST00000423435 1973 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 SLC25A39P2-201ENST00000537614 270 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC106730.1-201ENST00000566722 1090 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms